Salmonella LSCM RNA Gene DGGE

About Dr. Lee

Site Navigation




Peer-reviewed papers, Papers for potential publication, Book Chapters, Conference Presentations (2009 and after only)

Peer-reviewed papers


    2012

  1. C. Lees, S.Agidis, J. Marions and J. Lee. 2012. Arcobacter in Lake Erie beach waters: an emerging gastrointestinal pathogen linked with human-associated fecal contamination. Applied and Environmental Microbiology. 778:16:5511-5519
  2.  Rosenblum J, Ge C, Bohrerova Z, Yousef A, Lee, J. 2012. Ozonation as a Clean Technology for Fresh Produce Industry and Environment: Sanitizer Efficiency and Wastewater Quality. Journal of Applied Microbiology. 113:4:837-845.
  3.  Lee CS and Lee J. 2012. Application of host-specific source tracking tools for rapid identification of fecal contamination in fresh produce by human and livestock. Journal of the Science of Food and Agriculture. (Epub ahead of print) DOI 10.1002/jsfa.5855
  4. Marions J, Lee, J. Wilkins, S. Lemeshow, E. C. Lee, Waletzko, T. Buckley. 2012. In Vivo Phycocyanin Flourometry as a Rapid Screening Tool for Predicting Elevated Microcystin Concentrations at Inland Beaches. Environmental Science & Technology. 46:8:4523-4531.
  5.  Ge C, Lee CS, Yu Z, Lee J. 2012. Comparison of Bacterial Profiles of Fish between Storage Conditions at Retails Using DGGE and Banding Pattern Analysis: Consumer’s Perspective. Food & Nutrition Sciences 3:2:190-200.
  6.  Ge C, Lee C, Lee J. 2012. The Impact of Extreme Weather Events on Salmonella Internalization in Lettuce and Green Onion. Food Research International 45:2:1118-112
  7.  Ratphitagsantis W, Parks E, Lee CS, Wu R_Y. A, Lee J. 2012. High-throughput detection of spore contamination in food packages and food powers using tiered approach of ATP bioluminescence and real-time PCR. LWT-Food Science & Technology 46:1:341-348.

    2011
                                                                                                                 
  8. Deininger, RA Lee J, Clark, R. 2011. Rapid detection of bacteria in drinking water and water contamination case studies. Frontiers of Earth Science. 5:4:378-389.
  9. Lee, CS, Wetzels, K  Wozniak D, Buckley, T, Lee, J. 2011. Development of a real-time PCR assay targeting the gyrB gene for rapid detection of Pseudomonas aeruginosa in water and aerosols. Journal of Applied Microbiology. 111:4:893-903.
  10. Lutz, J, Lee, J. 2011. Prevalence and Antimicrobial Resistance of Pseudomonas aeruginosa in Swimming Pools and Hot Tubs. International Journal of Environmental Research & Public Health 8:554-564 
  11. Lee, CS, Marions, J, Lee, J. 2011. A Novel genetic marker for the rapid detection of  Bacteroides fragilis in beach water as a human-specific fecal indicator. Journal of Water and Health 9:2:253-264. 2011.

    2010

  12. Lee, J, Lee, CS, Hugnnin, KM, Maute, CJ, Dysko, RC. 2010. Bacteria from drinking water supply and their fate in gastrointestinal tracts of germ-free mice: a phylogenetic comparison study. Water Research. 44:17:5050-5058.
  13.  Lee, CS, Lee, J. 2010. Evaluation of new gyrB-based real-time PCR system for the detection of B. fragilis as an indicator of human-specific fecal contamination. Journal of Microbiological Methods. 82:3:311-318.
  14. Marions, J, Lee, J, Lemeshow, S, Buckley, T. 2010. Association of gastrointestinal illness and recreational water exposure at an inland U.S. beach. Water Research. 44:4796-4804.
  15. Wetzels, K, Lee, J, Lee, CS, Binkley, M. 2010. Comparison of microbial diversity of edible flowers and basil grown with organic versus conventional methods. Canadian Journal of Microbiology. 56:11:943-951.
  16.  Lee, J, Deininger, RA. 2010. Real-time determination of the efficacy of residual disinfection to limit wastewater contamination in a water distribution system using filtration-based luminescence. Water Environment Research. 82:5:475-478.
  17.  Lee, J, Deininger, RA. 2010. Rapid detection of enterococci in marine beach water by immunomagnetic capture and bioluminescence and its comparison with conventional methods. Journal of Environmental Health. 72:9:8-13.

    2009 and previous
     
  18.  Meier, TR, Maute, CJ, Cadillac, JM, Lee, J, Righter, DJ, Hugunin, KMS, Deininger, RA, Dysko, RC. 2008. Quantification, Distribution and Possible Source of Bacterial Biofilm in Rodent Automated Watering Systems. Journal of the American Association for Laboratory Animal Science. 79:2:1-9. 
  19. Mins, K, Lee, J, Deininger, RA. 2006. Simple and Rapid Method for Detection of Bacterial Spores in Powder Useful for First Responders. Journal of Environmental Health. 68:8:34-37 
  20.  Websters, AR, Lee, J, Deininger, RA. 2005. Rapid Assessment of Microbial Hazards in Metalworking Fluids. Journal of Occupational & Environmental Hygiene 2:1-6.
  21. Deininger, RA, Lee, J. 2005. Comments on ‘An ATP based method for monitoring the microbiological drinking water quality in a distribution network’ by E. Delahaye et al., Water Research 39:12:2778-2779.
  22. Lee, J, Deininger, RA. 2004. A Rapid Screening Method for Detection of Viable Spores in Powder Using Bioluminescence. Luminescence. 19:209-211.
  23. Lee, J, Deininger, RA. 2004. Detection of E.coli in Beach Water within One Hour Using Immunomagnetic Separation and ATP Bioluminescence. Luminescence. 19:31-36. 
  24. Lee, J, Deininger, RA. 2003. Microbial Response to Disinfectant Change to Ozone in a Full-Scale Distribution System. Ozone: Science & Engineering. 25:6:473-484.
  25.  Deininger, RA Lee, J. 2001. Rapid Determination of Bacteria in Drinking Water Using an ATP Assay. Field Analytical Chemistry and Technology.5:4:185-189.
  26. Lee, J, Deininger, RA. 2001. Rapid Quantification of Viable Bacteria in Water Using ATP Assay, American Laboratory News. 33:21:24-26.
  27. Lee, J, Deininger, RA. and R. M. Fleece, 2001. Rapid Determination of Bacteria in Pools. Journal of Environmental Health.  64:1:9-13.
  28. Lee, J, Deininger, RA. 2000. Survival of Bacteria after Ozonation. Ozone Science & Engineering. 22:1:65-76.
  29. Lee, J, Deininger, RA. 1999.  A Rapid Method for Detecting Bacteria in Drinking Water. Journal of Rapid Methods and Automation in Microbiology. 7:2:135-145.
  30.  Oh, Y, Lee, J, Kim, SJ. 1990. Degradation of Petroleum Hydrocarbon in Aquatic Environments in Korea. Journal of Environmental Research. 3:1-16.

Return to top of list

Papers for potential publication

  1. Agidis, S, Vedachalams,S, Mancl, K, Lee, J. Rapid determination of fecal bacteria in an onsite wastewater reuse system with human-specific IMS/ATP and qPCR. (revision)
  2. Ge, C, Lee, C, Lee, J. Localization  of Viable Salmonella Typhimurium Internalized through the surface of  Green Onion during Pre-harvest (Revision)
  3.  Cheung, MY, Liang, S, Lee, J. 2012. Toxin-producing Cyanobacteria in Freshwater: A Review of their Problems, Impact on Drinking Water Safety, and Efforts for Protecting Public Health. (Revision)
  4.  Park, E, Lee, C, Bisesi, M, Lee, J. 2012. Efficiency of Peracetic acid in inactivating bacteria, virus and spores measured with ATP bioluminescence, qPCR, and culture-based methods. (under review)
  5.  Ge, C, Bohrerova, Z, Lee, J. 2012. Inactivation of internalized Salmonella Typhimurium in lettuce and green onion using combination of ultraviolet C irradiation and chemical disinfectants. (under review)
  6.  Lee, C, Marion, J, Lee, J. 2012. Development and application of a TaqMan PCR assay targeting Catellicoccus marimammalium for assessing gull-specific fecal contamination at Lake Erie beaches. (under review) Agidis, S, Vedachalams,S, Mancl, K, Lee, J. Rapid determination of fecal bacteria in an onsite wastewater reuse system with human-specific IMS/ATP and qPCR. (revision)
  7.  Ge, C, Lee, C, Li, J, Kleinhenz, M, Gardner, D, Lee, J. 2012. Impact of extreme weather events and phytopathogen infection on internalization of Salmonella Typhimurium in lettuce. (under review)
  8.  Layton, B, Cao, Y, Ebentier, D, Hanley, K, Van De Werfhorst, L, Wang, D, Madi, T, Whitman, R, Byappanahalli, M, Ballesté, E, Meijer, W, Schriewer, A, Wuertz, S, Converse, R, Noble, R, Srinivasan, S, Rose, J, Lee, CS, Lee, J, Shields, J, Stewart, J, Reischer, G, Farnleitner, A, Sinigalliano, C, Rodrigues, R, Lozach, S, Gourmelon, M, Peed, L, Shanks, O, Jay, J, Holden, T, Boehm, A, Griffith, J. 2012. Performance of human fecal-associated PCR-based assays: An international source identification method evaluation (under review)
  9.  Sinigalliano, C, Ervin, J, Van De Werfhorst, L, Wang, D, Wanless, D, Bartkowiak, J, Layton, B, Raith, M, Schriewer, A, Goodwin, K,  Lee, J,  Lee, C, Boehm, A, Noble, R, Holden, P, Jay, J, Wuertz, S, Byappanahalli, M, Sadowsky, M, Meijer, W, Gourmelon, M, Griffith, J, SantoDomingo, J.  2012. A multi-laboratory comparative assessment on the performance of seabird-host-specific microbial source tracking PCR assays targeting  Catellicoccus marimammalium. (under review)

Return to top of list

Book Chapters

  1. R.A. Deininger, J. Lee, R.M. Clark. Rapid Detection of Bacteria in Drinking Water and Wastewater Treatment Plants. In R.M. Clark et al (eds) Handbook of Water and Wastewater Systems Protection. Chapter 10. Springer Science+Business Media, LLC. Philadelphia, 2011.
  2. J. Lee and R. A.Deininger. Rapid Detection of Bacteria in Drinking Water. In A. Omelchenko et al (eds.) Modern Tools and Methods for Water Treatment for Improving Living Standards, pp. 71-78. Springer, Netherlands, 2005.
  3. J. Lee and R. A. Deininger. A Rapid Method for Detecting Bacteria in Drinking Water. In P. Stopa and Z. Orahovec (eds.). Technology for Combating WMD Terrorism, pp. 75-80. Kluwer Academic Publishers, Netherlands, 2004.
  4. R. A. Deininger, J. Lee, A. Ancheta and C. Somana. Public Health Aspects of Riverbank Filtration. In C. Ray (ed.). Riverbank Filtration: Understanding Contaminant Biogeochemistry and Pathogen Removal, pp. 153-176. Kluwer Academic Publishers, Netherlands, 2002.

Return to top of list

Conference Presentations (2009 and after only)

    2012

  1.  J. Lee. Microbial Population Structure in Freshwater Beaches Revealed by Pyrosequencing and Its Public Health Implications. 2012 International Meeting of the Microbiological Society of Korea, Seoul, Korea, May, 2012.
  2.  J. Lee. Who Polluted the Water? The Impact of Beach Water Contamination on Human Health, ‘Area of Excellence in Urban Water Infrastructure, Policy, and Infectious Diseases’ University of Illinois-Chicago, March 2012.
  3.  J. Lee. Impact of Contaminated Stormwater on Inland Beaches: A Public Health Perspective. Ohio Water Quality and Wastewater Conference, Columbus, Ohio, Feb 2012.
  4.  J. Lee. Rapid Determination of On-site Wastewater Treatment Efficiency with Human-specific IMS/ATP and qPCR. Ohio Water Quality and Wastewater Conference, Columbus, Ohio, Feb 2012.
  5.  J. Lee. Does Extreme Weather Events Affect Fresh Produce Safety? Ohio Water Quality and Wastewater Conference, Columbus, Ohio, Feb 2012.
  6.  S. Rymut, C. Ge, C. Lee and J. Lee. Internalization of Salmonella Typhimurium in Hydroponically Grown Mung Bean Sprouts with the Events of Water Contamination. International Association for Food Protection Annual Meeting. Providence, Rhode Island, July 2012.
  7.  C. Ge, J. Lee. Use of UV-C light and Chemical Sanitizers to Inactivate Internalized Salmonella Typhimurium in Iceberg Lettuce. International Association for Food Protection Annual Meeting. Providence, Rhode Island, July 2012.
  8.  J. Lee and C.S. Lee. Cyanobacteria and Legionella in Freshwater Beaches: a Hidden Public Health Risk under Current Beach Monitoring Systems. American Society for Microbiology 112th General Meeting, San Francisco, June 2012.
  9.  C. Lee, J. Marion and J. Lee. The potential association between toxin-producing Cayanobacteria and fecal contamination s in Lake Erie beaches beach waters. American Society for Microbiology 112th General Meeting, San Francisco, June 2012.
  10.  C.S. Lee and J. Lee. Application of Microbial Source Tracking for Rapid Detection of Animal- and Human-Specific Fecal Contamination in Fresh Produce. American Society for Microbiology 112th General Meeting, San Francisco, June 2012.
  11.  B. Layton, Y. Cao, E. Ballesté, A. Farnleitner, M. Gourmelon, J. Lee, W. Meijer, R. Noble, L. Peed, G. Reischer, L. Van De Werfhorst, A. Boehm, P. Holden, J. Jay, O. Shanks, J. Griffith. Performance of human fecal-associated PCR-based methods in the California Source Identification Protocol Project. American Society for Microbiology 112th General Meeting, San Francisco, June 2012.
  12.  C. Ge, Z. Bohrerova, J. Lee. Inactivation of Internalized Salmonella Typhimurium in fresh produce with combined application of UVC and chemical sanitizers. Institute of Food Technologists Annual Meeting, Las Vegas, June 2012.
  13.  S.H. Park, V.M. Balasubramaniamab, S. K. Sastry, J. Lee. Inactivation of Bacillus amyloliquefaciens and Bacillus stearothermophilus Spores using Combined Pressure, Electric field, and Heat Treatment Institute of Food Technologists Annual Meeting, Las Vegas, June 2012.

    14.  

    2011

  14. V. Burrowes, J. Marion, C.S. Lee and J. Lee. Intense Human Impact on Microbial Contamination during the Ohio State University Annual Mirror Lake Jump 2010. American Society for Microbiology 111th General Meeting, New Orleans, May 2011.
  15. C. Lee and J. Lee. A TaqMan® Real-time PCR Assay Targeting Catellicoccus spp. for Rapid Detection of Gull-Specific Fecal Contamination in Recreational Water. American Society for Microbiology 111th General Meeting, New Orleans, May 2011.
  16. J. Marion, J. Lee, and T. Buckley. Reservoir Inflows and Total Phosphorus: Practical and Rapid Predictors of E. coli Densities at Inland Ohio Beaches. American Society for Microbiology 111th General Meeting, New Orleans, May 2011.
  17. J. Lee, C. Lee, and J. Marion. Identifying Major Fecal Contamination Sources using Multiple Genetic Markers at Lake Erie Beaches. American Society for Microbiology 111th General Meeting, New Orleans, May 2011.
  18. J. Lutz and J. Lee. Evaluation of Four Devices for Surface Sampling of S. aureus-contaminated Surfaces. American Society for Microbiology 111th General Meeting, New Orleans, May 2011.
  19. P.S. Agidi, S. Vedachalam, K. Mancl, and J. Lee. Rapid determination of on-site wastewater treatment efficiency targeting human-specific Bacteroides fragilis using IMS/ATP and qPCR. American Society for Microbiology 111th General Meeting, New Orleans, May 2011.
  20. C.S. Lee, C. Lee, Q. Wang, L. Saif and J. Lee. Monitoring of Human Adenovirus, Enterovirus and Norovirus in Ohio Inland Beaches. American Society for Microbiology 111th General Meeting, New Orleans, May 2011.
  21. J. Lee, C. Lee, J. Marion, F. Lichtkoppler, R. Zondag. Who Polluted the Water? Microbial Forensics for Identifying Major Fecal Contamination Sources at Lake Erie Beaches. National Beach Conference, Miami, Florida, March 2011.
  22. J. Marion, J. Lee, and T. Buckley. Reservoir Inflows and Total Phosphorus: Practical and Rapid Predictors of E. coli Densities at Inland Ohio Beaches. National Beach Conference, Miami, Florida, March 2011.
  23. J. Lee, J. Marion, C.S. Lee, and T. Buckley. Fecal Indicators measured with Culture Method and qPCR and their Association with Recreational Waterborne Illness at a Freshwater Beach. National Beach Conference, Miami, Florida, March 2011.
  24. C. Ge and J. Lee. Salmonella Internalization Affected by Water Stress. . Institute of Food Technologists Annual Meeting. New Orleans, July, 2011.
  25. W. Ratphitagsanti and J. Lee. Rapid assessment of disinfection efficiency of ozone, chlorine dioxide and chlorine using Bacillus spores as a protozoa surrogate. National Environmental Health Association Meeting, Columbus, Ohio, June 2011.
  26. J. Lee, J. Marion, C.S. Lee and T. Buckley. Integrative health risks measured with multiple genetic markers in Ohio Inland Beaches. National Environmental Health Association Meeting, Columbus, Ohio, June 2011.
  27. J. Lutz and J. Lee. Staphylococcus aureus on public transportation. National Environmental Health Association Meeting, June 2011.
  28. J. Lutz and J. Lee. Air and surface sampling for indoor environmental contaminants. National Environmental Health Association Meeting, June 2011.
  29. C. Ge, J. Rosenblum, Z. Bohrerova, A. Yousef and J. Lee. Ozonation for environmental friendly treatment of fresh produce and improved wastewater quality National Environmental Health Association Meeting, June 2011.

    30. 2010

  30. J. Marion, J. Lee and T. Buckley. Reservoir Inflows and Total Phosphorus: Practical Predictors of Microbial Risk at Inland Ohio Beaches. The Ohio River Basin Consortium for Research and Education, 26th Annual Scientific Symposium. October 17-19, 2010. Highland Heights, KY.
  31. J. Marion, J. Lee and T. Buckley. Wet Weather and Total Phosphorus: Practical Predictors of Advisory Conditions at Inland Ohio Beaches. 39th Annual Water Management Association of Ohio Annual Conference. November 17-18, 2010. Columbus, OH.
  32. K. Wetzel, J. Lee, C. Lee, M. Binkley. Comparison of the Microbial Contamination Associated with Fresh Herbs and Edible Flowers using DNA Sequencing Analysis. International Association for Food Protection Annual Meeting. Anaheim, California, August 1-4, 2010.
  33. C. Ge, J. Lee. Microbial Risk of Raw Fish Consumption Determined by PCR-DGGE and Fingerprinting Approach. International Association for Food Protection Annual Meeting. Anaheim, California, August 1-4, 2010.
  34. E. Park, P. Chiang, C. Lee, J. Lee. Rapid Detection of Spore Contamination in Water, Beverage, and Powder by ATP luminescence and Real-time PCR. Institute of Food Technologists Annual Meeting. Chicago, Illinois, July 17-20, 2010.
  35. C. Ge, C.S. Lee, J. Lee. Metagenomic Approach to Determine Microbial Safety of Raw Fish by PCR-DGGE of 16S rRNA gene and Fingerprinting Analysis. Institute of Food Technologists Annual Meeting. Chicago, Illinois, July 17-20, 2010.
  36. C.S. Lee and J. Lee. Evaluation of New Molecular Probes Targeting gyrB gene for the Rapid Detection of Bacteroides fragilis in Beach Water. American Society for Microbiology 110th General Meeting, San Diego, California, May 23-27, 2010.
  37. J. Lee, C.S. Lee, D. Wozniak, T. Buckley. A Novel Real-time PCR assay for Sensitive Detection of Pseudomonas aeruginosa in Water and Aerosol with gyr-specific Primers. American Society for Microbiology 110th General Meeting, San Diego, California, May 23-27, 2010.
  38. J. Lutz and J. Lee. Prevalence and Antimicrobial Resistance of Pseudomonas aeruginosa in Leisure Spa and Swimming Pools. American Society for Microbiology 110th General Meeting, San Diego, California, May 23-27, 2010.
  39. C. Ge, C.S. Lee and J. Lee. Comparison of Microbial Community Profile of Seafood between the Storage Types using DGGE and Fingerprinting Analysis. American Society for Microbiology 110th General Meeting, San Diego, California, May 23-27, 2010.
  40. K. Wetzel, J. Lee, C.S. Lee, M. Binkley. Application of Phylogenetic Approach for Comparing Microbial Diversity of Fresh Produce between Packaging Types and Growing Methods. American Society for Microbiology 110th General Meeting, San Diego, California, May 23-27, 2010.
  41. J.W. Marion, J. Lee, T.J. Buckley, J. Rosenblum, P. Chiang, M.J. Lofton, S. Zolinski, K. Wetzel, M. Farley. Association of Illness and Recreational Water Exposure During Non-Advisory conditions at an Inland U.S. Beach. The Water Research Conference by International Water Association. Lisbon, Portugal, April, 2010.
  42. C.S. Lee, J. Lee, J.W. Marion. A Novel Real-Time PCR Method for Quantitative Detection of Bacteroides fragilis in Inland Recreational Waters by gyrB Gene Amplification. The Water Research Conference by International Water Association. Lisbon, Portugal, April, 2010.
  43. J. Lee, K. Wetzel, C. Lee, K.M.S. Hugnnin, C.J. Maute, R.C. Dysko. Comparison of Microbial Community from Drinking Water and Gastrointestinal Tracts of Germ-Free Mice Using 16S rRNA gene sequencing. The Water Research Conference by International Water Association. Lisbon, Portugal, April, 2010.
  44. J. Lee. Waterborne and Foodborne Disease Research at Environmental Health Sciences. Environmental Health Science Advisory Committee. Columbus, Ohio, October 2010.
  45. J. Lee and M. Binkley. Microbial Safety of Edible Flower and Herbs. Ohio Association for Food Protection, January 13, 2010.
  46. T.M. Cotroneo, A.L. Hampton, C.J. Maute, J. Lee, C.S. Lee, K. R.C. Dysko. Biofilm Bacteria from Drinking Water: Colonization of Germ-Free Mice and Bacterial Speciation. 61th National Meeting of American Association for Laboratory Animal Science. Atlanta, Georgia, October 2010.

    47. 2009

  47. K.M.S. Hugnnin, C.J. Maute, J. Lee, C.S. Lee, K. Wetzel, R.C. Dysko. Colonization of Abiotic Mice by Biofilm Bacteria. 60th National Meeting of American Association for Laboratory Animal Science. Denver, Colorado, November 2009.
  48. J. Marion and J. Lee. Determining Research Needs at Ohio Inland Lakes Not covered by the BEACH Act. National Beach Conference, Huntington Beach, California, April 2009.

Return to top of list